{
  "_id": "6a1f0bbdb401979e7341c81a",
  "Package": "Arothron",
  "Type": "Package",
  "Title": "Geometric Morphometric Methods and Virtual Anthropology Tools",
  "Version": "2.0.5",
  "Author": "Antonio Profico, Costantino Buzi, Silvia Castiglione, Marina\nMelchionna, Paolo Piras, Pasquale Raia, Alessio Veneziano",
  "Maintainer": "Antonio Profico <antonio.profico@gmail.com>",
  "Description": "Tools for geometric morphometric analysis. The package\nincludes tools of virtual anthropology to align two not\narticulated parts belonging to the same specimen, to build\nvirtual cavities as endocast (Profico et al, 2021\n<doi:10.1002/ajpa.24340>).",
  "License": "GPL-2",
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  "Packaged": {
    "Date": "2026-05-17 09:48:39 UTC",
    "User": "root"
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  "Config/pak/sysreqs": "cmake libfreetype6-dev libglu1-mesa-dev make\ntexlive libicu-dev libpng-dev libuv1-dev libgl1-mesa-dev\nzlib1g-dev",
  "Repository": "https://aprofico.r-universe.dev",
  "Date/Publication": "2023-02-01 11:40:08 UTC",
  "RemoteUrl": "https://github.com/cran/Arothron",
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  "_created": "2026-05-17T09:48:39.000Z",
  "_published": "2026-06-02T16:58:37.945Z",
  "_distro": "noble",
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  "_buildurl": "https://github.com/r-universe/aprofico/actions/runs/25987447738",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/Arothron",
  "_commit": {
    "id": "79c614f1b17f54a72648fbcd4d924907a768f755",
    "author": "Antonio Profico <antonio.profico@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 2.0.5\n",
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  "_updates": [],
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  "_stars": 0,
  "_contributors": [
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  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
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    "extra/contents.json",
    "extra/readme.html",
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    "manual.pdf"
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  "_realowner": "aprofico",
  "_cranurl": false,
  "_releases": [
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      "date": "2018-04-03"
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      "version": "1.0.1",
      "date": "2018-06-14"
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  "_exports": [
    "aro.clo.points",
    "arraytolist",
    "bary.mesh",
    "compare_check.set",
    "CScorreffect",
    "dec.curve",
    "dta",
    "endomaker",
    "endomaker_dir",
    "export_amira",
    "export_amira.path",
    "ext.int.mesh",
    "ext.mesh.rai",
    "grid_pov",
    "image2palettes",
    "landmark_frm2amira",
    "listtoarray",
    "localmeshdiff",
    "MLECScorrection",
    "noise.mesh",
    "out.inn.mesh",
    "patches_frm2amira",
    "PCscoresCorr",
    "permutangle",
    "pov_selecter",
    "read.amira.dir",
    "read.amira.set",
    "read.path.amira",
    "repmat",
    "spherical.flipping",
    "trasf.mesh",
    "twodvarshape",
    "twodviews",
    "volendo"
  ],
  "_datasets": [
    {
      "name": "Altapic",
      "title": "example dataset",
      "object": "Altapic",
      "file": "Altapic.rda",
      "class": [
        "array"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "DM_base_sur",
      "title": "example dataset",
      "object": "DM_base_sur",
      "file": "DM_base_sur.rda",
      "class": [
        "mesh3d"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "DM_face_sur",
      "title": "example dataset",
      "object": "DM_face_sur",
      "file": "DM_face_sur.rda",
      "class": [
        "mesh3d"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "DM_set",
      "title": "example dataset",
      "object": "DM_set",
      "file": "DM_set.rda",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 32,
      "table": true,
      "tojson": true
    },
    {
      "name": "endo_set",
      "title": "example dataset",
      "object": "endo_set",
      "file": "endo_set.rda",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 55,
      "table": true,
      "tojson": true
    },
    {
      "name": "femsets",
      "title": "example dataset",
      "object": "femsets",
      "file": "femsets.rda",
      "class": [
        "array"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "human_skull",
      "title": "example dataset",
      "object": "human_skull",
      "file": "human_skull.rda",
      "class": [
        "mesh3d"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "krd1_tooth",
      "title": "example dataset",
      "object": "krd1_tooth",
      "file": "krd1_tooth.rda",
      "class": [
        "mesh3d"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "Lset2D_list",
      "title": "example dataset",
      "object": "Lset2D_list",
      "file": "Lset2D_list.rda",
      "class": [
        "list"
      ],
      "fields": [],
      "table": true,
      "tojson": true
    },
    {
      "name": "Lset3D_array",
      "title": "example dataset",
      "object": "Lset3D_array",
      "file": "Lset3D_array.rda",
      "class": [
        "array"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "malleus_bone",
      "title": "example dataset",
      "object": "malleus_bone",
      "file": "malleus_bone.rda",
      "class": [
        "mesh3d"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "MAs_sets",
      "title": "example dataset",
      "object": "MAs_sets",
      "file": "MAs_sets.rda",
      "class": [
        "array"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "primendoR",
      "title": "example dataset",
      "object": "primendoR",
      "file": "primendoR.rda",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "RMs_sets",
      "title": "example dataset",
      "object": "RMs_sets",
      "file": "RMs_sets.rda",
      "class": [
        "array"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "SCP1.mesh",
      "title": "example dataset",
      "object": "SCP1.mesh",
      "file": "SCP1.mesh.rda",
      "class": [
        "mesh3d"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "sinus_set",
      "title": "example dataset",
      "object": "sinus_set",
      "file": "sinus_set.rda",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 19,
      "table": true,
      "tojson": true
    },
    {
      "name": "SM_set",
      "title": "example dataset",
      "object": "SM_set",
      "file": "SM_set.rda",
      "class": [
        "array"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "yoda_set",
      "title": "example dataset",
      "object": "yoda_set",
      "file": "yoda_set.rda",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 16,
      "table": true,
      "tojson": true
    },
    {
      "name": "yoda_sur",
      "title": "example dataset",
      "object": "yoda_sur",
      "file": "yoda_sur.rda",
      "class": [
        "mesh3d"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "Arothron-package",
      "title": "eometric Morphometric Methods and Virtual Anthropology Tools",
      "topics": [
        "Arothron-package",
        "Arothron"
      ]
    },
    {
      "page": "Altapic",
      "title": "example dataset",
      "topics": [
        "Altapic"
      ]
    },
    {
      "page": "aro.clo.points",
      "title": "aro.clo.points",
      "topics": [
        "aro.clo.points"
      ]
    },
    {
      "page": "arraytolist",
      "title": "arraytolist",
      "topics": [
        "arraytolist"
      ]
    },
    {
      "page": "bary.mesh",
      "title": "bary.mesh",
      "topics": [
        "bary.mesh"
      ]
    },
    {
      "page": "compare_check.set",
      "title": "compare_check.set",
      "topics": [
        "compare_check.set"
      ]
    },
    {
      "page": "CScorreffect",
      "title": "CScorreffect Plot showing the correlation in the shape space between original and combined dataset omitting or including the normalization factors calculated with Arothron and MLECScorrection",
      "topics": [
        "CScorreffect"
      ]
    },
    {
      "page": "dec.curve",
      "title": "dec.curve",
      "topics": [
        "dec.curve"
      ]
    },
    {
      "page": "DM_base_sur",
      "title": "example dataset",
      "topics": [
        "DM_base_sur"
      ]
    },
    {
      "page": "DM_face_sur",
      "title": "example dataset",
      "topics": [
        "DM_face_sur"
      ]
    },
    {
      "page": "DM_set",
      "title": "example dataset",
      "topics": [
        "DM_set"
      ]
    },
    {
      "page": "dta",
      "title": "dta",
      "topics": [
        "dta"
      ]
    },
    {
      "page": "endo_set",
      "title": "example dataset",
      "topics": [
        "endo_set"
      ]
    },
    {
      "page": "endomaker",
      "title": "endomaker",
      "topics": [
        "endomaker"
      ]
    },
    {
      "page": "endomaker_dir",
      "title": "endomaker_dir",
      "topics": [
        "endomaker_dir"
      ]
    },
    {
      "page": "export_amira",
      "title": "export_amira",
      "topics": [
        "export_amira"
      ]
    },
    {
      "page": "export_amira.path",
      "title": "export_amira.path",
      "topics": [
        "export_amira.path"
      ]
    },
    {
      "page": "ext.int.mesh",
      "title": "ext.int.mesh",
      "topics": [
        "ext.int.mesh"
      ]
    },
    {
      "page": "ext.mesh.rai",
      "title": "ext.mesh.rai",
      "topics": [
        "ext.mesh.rai"
      ]
    },
    {
      "page": "femsets",
      "title": "example dataset",
      "topics": [
        "femsets"
      ]
    },
    {
      "page": "grid_pov",
      "title": "grid_pov",
      "topics": [
        "grid_pov"
      ]
    },
    {
      "page": "human_skull",
      "title": "example dataset",
      "topics": [
        "human_skull"
      ]
    },
    {
      "page": "image2palettes",
      "title": "image2palettes",
      "topics": [
        "image2palettes"
      ]
    },
    {
      "page": "krd1_tooth",
      "title": "example dataset",
      "topics": [
        "krd1_tooth"
      ]
    },
    {
      "page": "landmark_frm2amira",
      "title": "landmark_frm2amira",
      "topics": [
        "landmark_frm2amira"
      ]
    },
    {
      "page": "listtoarray",
      "title": "listtoarray convert a list into an array",
      "topics": [
        "listtoarray"
      ]
    },
    {
      "page": "localmeshdiff",
      "title": "localmeshdiff Calculate and Visualize local differences between two meshes",
      "topics": [
        "localmeshdiff"
      ]
    },
    {
      "page": "Lset2D_list",
      "title": "example dataset",
      "topics": [
        "Lset2D_list"
      ]
    },
    {
      "page": "Lset3D_array",
      "title": "example dataset",
      "topics": [
        "Lset3D_array"
      ]
    },
    {
      "page": "malleus_bone",
      "title": "example dataset",
      "topics": [
        "malleus_bone"
      ]
    },
    {
      "page": "MAs_sets",
      "title": "example dataset",
      "topics": [
        "MAs_sets"
      ]
    },
    {
      "page": "MLECScorrection",
      "title": "MLECScorrection Maximum Likelihood Estimation of the normalization factor to be applied to optimize the correlation between two landmark configurations to be combined by using twodviews and",
      "topics": [
        "MLECScorrection"
      ]
    },
    {
      "page": "noise.mesh",
      "title": "noise.mesh",
      "topics": [
        "noise.mesh"
      ]
    },
    {
      "page": "out.inn.mesh",
      "title": "out.inn.mesh",
      "topics": [
        "out.inn.mesh"
      ]
    },
    {
      "page": "patches_frm2amira",
      "title": "patches_frm2amira",
      "topics": [
        "patches_frm2amira"
      ]
    },
    {
      "page": "PCscoresCorr",
      "title": "PCscoresCorr Perform a correlation test between two matrices of PCscores",
      "topics": [
        "PCscoresCorr"
      ]
    },
    {
      "page": "permutangle",
      "title": "permutangle",
      "topics": [
        "permutangle"
      ]
    },
    {
      "page": "pov_selecter",
      "title": "pov_selecter",
      "topics": [
        "pov_selecter"
      ]
    },
    {
      "page": "primendoR",
      "title": "example dataset",
      "topics": [
        "primendoR"
      ]
    },
    {
      "page": "read.amira.dir",
      "title": "read.amira.dir",
      "topics": [
        "read.amira.dir"
      ]
    },
    {
      "page": "read.amira.set",
      "title": "read.amira.set",
      "topics": [
        "read.amira.set"
      ]
    },
    {
      "page": "read.path.amira",
      "title": "read.path.amira",
      "topics": [
        "read.path.amira"
      ]
    },
    {
      "page": "repmat",
      "title": "repmat",
      "topics": [
        "repmat"
      ]
    },
    {
      "page": "RMs_sets",
      "title": "example dataset",
      "topics": [
        "RMs_sets"
      ]
    },
    {
      "page": "SCP1.mesh",
      "title": "example dataset",
      "topics": [
        "SCP1.mesh"
      ]
    },
    {
      "page": "sinus_set",
      "title": "example dataset",
      "topics": [
        "sinus_set"
      ]
    },
    {
      "page": "SM_set",
      "title": "example dataset",
      "topics": [
        "SM_set"
      ]
    },
    {
      "page": "spherical.flipping",
      "title": "spherical.flipping",
      "topics": [
        "spherical.flipping"
      ]
    },
    {
      "page": "trasf.mesh",
      "title": "trasf.mesh",
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